- Predicted Gene MLOC_56339
MLOC_56339 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.08403 | 1.79646 | 1.61963 | 1.83244 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.68195 | 0.0422133 | 0.28549 | 0.550294 |
| INF1 | Young developing inflorescences (5mm) | 5.53168 | 5.18622 | 4.76779 | 4.60359 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.06384 | 7.63027 | 6.9266 | 7.51004 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.667934 | 1.21395 | 1.085 | 1.23623 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.19994 | 0.154034 | 0.243584 | 0.480699 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.39892 | 6.08639 | 5.0843 | 5.62602 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.214353 | 0.11845 | 0.261016 | 0.478558 |
CDS Structure of MLOC_56339
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56339.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g13170.1 |
-2 |
6e-179 |
526 |
278/458 (61%) |
13104.m01208 protein OsFBD10 - F-box and FBD domain containing protein, expressed |
| TAIR PP10 |
AT1G13570.1 |
-2 |
1e-11 |
68 |
94/398 (24%) |
F-box/RNI-like superfamily protein | chr1:4642528-4643930 REVERSE LENGTH=416 |