MLOC_56325 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.487095.710096.202375.64178
LEAShoots from the seedlings (10 cm shoot stage)49.172272.273971.278350.5696
INF1Young developing inflorescences (5mm)3.694274.331835.453053.56444
INF2Developing inflorescences (1-1.5 cm)3.79273.638673.919753.91423
ROORoots from the seedlings (10 cm shoot stage)4.785265.468195.953656.00098
NODDeveloping tillers at six leaf stage, 3rd internode12.628911.531815.058834.3281
CAR5Developing grain, bracts removed (5 DPA)4.044424.341264.183883.8439
CAR15Developing grain, bracts removed (15 DPA)2.528462.397932.244585.49913



CDS Structure of MLOC_56325






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56325.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358903NoneNoneNoneNone
AK372501NoneNoneNoneNone
MLOC_56325.2CUST_3587_PI427708080AvailableAvailablecontig_40729 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g57160.1 +3 0.0 1276 675/787 (86%) 13102.m06577 protein ELMO/CED-12 family protein, putative, expressed
TAIR PP10 AT3G24190.1 +3 0.0 1126 573/720 (80%) Protein kinase superfamily protein | chr3:8743319-8747703 FORWARD LENGTH=793