- Predicted Gene MLOC_56313
MLOC_56313 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56313_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56313_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0526592 | 0 | 0.0284182 | 0.0376706 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.5246 | 26.2233 | 16.336 | 11.4604 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0149643 | 0 | 0.0209044 | 0.0244137 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.227847 | 0.209488 | 0.132009 | 0.194281 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.136774 | 0.0760744 | 2.76298 | 1.31927 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0185866 | 0.0166502 | 0 | 0.0149237 |
CAR15 | Developing grain, bracts removed (15 DPA) | 51.5697 | 50.5697 | 45.0249 | 83.1362 |
CDS Structure of MLOC_56313
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56313.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g01280.2 |
+2 |
2e-19 |
87 |
56/71 (79%) |
13105.m00053 protein expressed protein |
TAIR PP10 |
AT5G08391.1 |
+2 |
3e-13 |
69 |
25/50 (50%) |
Protein of unknown function (DUF 3339) | chr5:2699357-2699566 FORWARD LENGTH=69 |