- Predicted Gene MLOC_56299
MLOC_56299 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0 | 0 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0.166795 | 0.107341 | 0.0685795 | 0.0862446 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0859151 | 0 | 0.0614167 | 0.0928438 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.292994 | 0 | 0 | 0.282479 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0180591 | 0.0644206 | 0.108882 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.162056 | 0.194663 | 0 | 0.159766 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.512173 | 0.0643181 | 0.472557 | 0.684013 |
CDS Structure of MLOC_56299
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56299.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g07310.1 |
+2 |
7e-95 |
306 |
154/390 (39%) |
13110.m00649 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 |
AT4G20520.1 |
+2 |
7e-14 |
73 |
39/97 (40%) |
RNA binding;RNA-directed DNA polymerases | chr4:11045912-11047716 FORWARD LENGTH=376 |