- Predicted Gene MLOC_56293
MLOC_56293 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 101.165 | 149.479 | 134.102 | 147.273 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 107.037 | 105.371 | 91.7999 | 93.5922 |
| INF1 | Young developing inflorescences (5mm) | 96.1866 | 103.658 | 110.772 | 95.236 |
| INF2 | Developing inflorescences (1-1.5 cm) | 150.969 | 102.484 | 123.541 | 143.87 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 132.923 | 153.487 | 118.537 | 200.922 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 88.7246 | 86.1005 | 98.2964 | 309.832 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 98.4366 | 86.9393 | 88.886 | 96.3049 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 27.0025 | 23.6524 | 22.9851 | 60.763 |
CDS Structure of MLOC_56293
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56293.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g07760.2 |
-2 |
0.0 |
1523 |
722/812 (89%) |
13101.m00798 protein phospholipase D, putative, expressed |
| TAIR PP10 |
AT3G15730.1 |
-2 |
0.0 |
1360 |
639/814 (79%) |
| Symbols: PLDALPHA1, PLD | phospholipase D alpha 1 | chr3:5330835-5333474 FORWARD LENGTH=810 |
