MLOC_56290 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.344822.076417.433116.6267
LEAShoots from the seedlings (10 cm shoot stage)21.087419.854418.169415.1152
INF1Young developing inflorescences (5mm)14.496312.328911.750910.0406
INF2Developing inflorescences (1-1.5 cm)11.264513.393912.259812.1468
ROORoots from the seedlings (10 cm shoot stage)6.9835311.03249.5143410.3848
NODDeveloping tillers at six leaf stage, 3rd internode10.549511.880712.802332.444
CAR5Developing grain, bracts removed (5 DPA)26.626423.852524.214621.1611
CAR15Developing grain, bracts removed (15 DPA)6.749836.458596.4756613.8863



CDS Structure of MLOC_56290






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK248573.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248573.1CUST_23187_PI427708080NoneNoneNone
MLOC_56290.3NoneAvailableAvailablecontig_40699 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----