- Predicted Gene MLOC_56286
MLOC_56286 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56286_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56286_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 26.7602 | 20.7346 | 23.388 | 22.5592 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.29385 | 10.1606 | 9.53556 | 6.29569 |
INF1 | Young developing inflorescences (5mm) | 0.4871 | 0.894519 | 0.17902 | 0.479375 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.491114 | 0.555322 | 0.807078 | 0.655419 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.87264 | 7.77124 | 10.1883 | 8.99762 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.18302 | 3.82477 | 2.4865 | 9.32734 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.84095 | 5.14877 | 4.78376 | 4.50461 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.90006 | 2.05949 | 1.52683 | 4.65244 |
CDS Structure of MLOC_56286
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56286.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g10940.1 |
-1 |
1e-145 |
432 |
295/374 (79%) |
13105.m01183 protein metal cation transporter, putative, expressed |
TAIR PP10 |
AT1G10970.1 |
-1 |
1e-86 |
280 |
196/382 (51%) |
| Symbols: ZIP4, ATZIP4 | zinc transporter 4 precursor | chr1:3665201-3666933 REVERSE LENGTH=408 |