- Predicted Gene MLOC_56278
MLOC_56278 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 272.378 | 220.833 | 257.949 | 213.239 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 326.916 | 50.602 | 110.32 | 125.858 |
| INF1 | Young developing inflorescences (5mm) | 39.6868 | 25.3043 | 20.7312 | 23.5208 |
| INF2 | Developing inflorescences (1-1.5 cm) | 50.8416 | 71.6454 | 79.3647 | 66.2967 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 133.879 | 106.745 | 141.686 | 106.236 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 547.54 | 604.284 | 162.79 | 1094.57 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 215.806 | 203.705 | 176.134 | 175.017 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.01977 | 2.71331 | 5.28973 | 9.84972 |
CDS Structure of MLOC_56278
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56278.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g16450.1 |
+1 |
3e-135 |
406 |
218/247 (88%) |
13104.m01485 protein aquaporin protein, putative, expressed |
| TAIR PP10 |
AT2G16850.1 |
+1 |
2e-118 |
360 |
194/245 (79%) |
| Symbols: PIP3B, PIP2;8 | plasma membrane intrinsic protein 2;8 | chr2:7301647-7303180 FORWARD LENGTH=278 |