MLOC_56274 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.06026620.10619900.125544
LEAShoots from the seedlings (10 cm shoot stage)0.3586110.09855040.1754060.195167
INF1Young developing inflorescences (5mm)0.04796640.050797600.0486984
INF2Developing inflorescences (1-1.5 cm)0.1323590.2497050.1135920.215945
ROORoots from the seedlings (10 cm shoot stage)00.12235100.382137
NODDeveloping tillers at six leaf stage, 3rd internode00.0080209200.0706109
CAR5Developing grain, bracts removed (5 DPA)0.055459800.2276740.152851
CAR15Developing grain, bracts removed (15 DPA)000.14120.34084



CDS Structure of MLOC_56274






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56274.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56274.1CUST_7796_PI427708083AvailableAvailablecontig_40684 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g61170.1 +1 1e-44 159 84/152 (55%) 13103.m06732 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----