- Predicted Gene MLOC_56273
MLOC_56273 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.047194 | 0.163898 | 0 | 0.145377 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.223507 | 0.0782066 | 0.0656067 | 0.10476 |
| INF1 | Young developing inflorescences (5mm) | 0.0816883 | 0.209096 | 0.0996763 | 0.0943436 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.234853 | 0.351432 | 0.275154 | 0.285105 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.188877 | 0.417246 | 0.281112 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0370261 | 0.0113984 | 0.137536 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0878433 | 0.0803098 | 0.0956375 | 0.0700392 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0880487 | 0.0920016 | 0.0642004 | 0.175836 |
CDS Structure of MLOC_56273
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56273.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g24050.1 |
+3 |
8e-147 |
348 |
171/263 (65%) |
13112.m02445 protein retrotransposon protein, putative, unclassified, expressed |
| TAIR PP10 |
ATMG00860.1 |
+3 |
4e-34 |
127 |
65/131 (50%) |
| Symbols: ORF158 | DNA/RNA polymerases superfamily protein | chrM:235916-236392 FORWARD LENGTH=158 |