MLOC_56261 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains84.0538158.308146.543127.946
LEAShoots from the seedlings (10 cm shoot stage)106.331120.364101.60691.1855
INF1Young developing inflorescences (5mm)64.741260.166358.782547.6141
INF2Developing inflorescences (1-1.5 cm)79.092382.689376.758580.456
ROORoots from the seedlings (10 cm shoot stage)66.5168112.54977.8214119.751
NODDeveloping tillers at six leaf stage, 3rd internode39.548138.80441.1014126.697
CAR5Developing grain, bracts removed (5 DPA)93.41684.628193.691879.9139
CAR15Developing grain, bracts removed (15 DPA)16.560718.270815.052134.2131



CDS Structure of MLOC_56261






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56261.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_56261.2CUST_13495_PI427708080AvailableAvailablecontig_406754 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g52900.1 -3 0.0 1739 957/1049 (91%) 13104.m05436 protein ABC transporter family protein, putative, expressed
TAIR PP10 AT2G34660.2 -3 0.0 1422 787/1051 (75%) | Symbols: MRP2, ABCC2, AtABCC2 | multidrug resistance-associated protein 2 | chr2:14603267-14612387 FORWARD LENGTH=1623