- Predicted Gene MLOC_56258
MLOC_56258 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 13.1881 | 18.3027 | 18.7471 | 14.6533 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.7745 | 12.7109 | 12.2515 | 10.1793 |
| INF1 | Young developing inflorescences (5mm) | 13.4097 | 13.0385 | 13.143 | 9.4439 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.5915 | 12.4467 | 12.591 | 11.5609 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.6889 | 18.1701 | 14.589 | 17.1928 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 16.4012 | 15.7145 | 12.2193 | 45.3772 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 17.0444 | 16.5028 | 18.3278 | 14.2531 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.41952 | 6.03734 | 5.92704 | 11.8764 |
CDS Structure of MLOC_56258
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56258.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g21000.1 |
+1 |
0.0 |
1193 |
604/705 (86%) |
13110.m01733 protein nucleoside-triphosphatase, putative, expressed |
| TAIR PP10 |
AT4G19180.1 |
+1 |
0.0 |
679 |
366/674 (54%) |
GDA1/CD39 nucleoside phosphatase family protein | chr4:10485518-10487868 REVERSE LENGTH=740 |
