- Predicted Gene MLOC_56250
MLOC_56250 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56250_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56250_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 40.1781 | 31.1197 | 27.5888 | 32.9381 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 41.9933 | 129.436 | 47.9618 | 61.5691 |
INF1 | Young developing inflorescences (5mm) | 0 | 0.118874 | 0.286063 | 0.212173 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.192046 | 0.131975 | 0.166961 | 0.19278 |
ROO | Roots from the seedlings (10 cm shoot stage) | 28.2628 | 19.2319 | 42.3924 | 26.5993 |
NOD | Developing tillers at six leaf stage, 3rd internode | 284.821 | 454.101 | 757.493 | 1467.07 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.47905 | 1.61376 | 1.98972 | 1.79745 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.190929 | 0.0551761 | 0.0685657 | 0.287718 |
CDS Structure of MLOC_56250
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56250.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g48180.1 |
+1 |
4e-138 |
403 |
226/285 (79%) |
13106.m05121 protein glycosyl hydrolases family 16, putative, expressed |
TAIR PP10 |
AT4G25810.1 |
+1 |
1e-103 |
314 |
164/266 (62%) |
| Symbols: XTR6, XTH23 | xyloglucan endotransglycosylase 6 | chr4:13128694-13129715 FORWARD LENGTH=286 |