MLOC_5625 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains01.815763.786010
LEAShoots from the seedlings (10 cm shoot stage)7.403572.1403200
INF1Young developing inflorescences (5mm)2.251132.27643.918690
INF2Developing inflorescences (1-1.5 cm)3.387373.714574.198530
ROORoots from the seedlings (10 cm shoot stage)6.654052.917614.103280
NODDeveloping tillers at six leaf stage, 3rd internode6.046694.429394.426140
CAR5Developing grain, bracts removed (5 DPA)3.098151.967654.283920
CAR15Developing grain, bracts removed (15 DPA)1.660531.57992.872420



CDS Structure of MLOC_5625






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367852
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367852CUST_21535_PI427708080NoneNoneNone
MLOC_46270.1NoneAvailableNonecontig_287834 (Not mapped)
MLOC_5625.1NoneAvailableNonecontig_1364662 (Not mapped)
MLOC_66327.2NoneAvailableAvailablecontig_51382 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----