- Predicted Gene MLOC_56246
MLOC_56246 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.330566 | 0.581112 | 0.405667 | 0.90911 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.905591 | 1.06606 | 0.500922 | 0.901093 |
| INF1 | Young developing inflorescences (5mm) | 1.38418 | 1.81846 | 1.20834 | 1.61816 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.3927 | 0.389834 | 2.4843 | 2.08947 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.59603 | 0.322386 | 0.826573 | 0.550781 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.714333 | 0.308119 | 3.52611 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.46313 | 1.13488 | 0.518724 | 1.64743 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.43926 | 1.32938 | 1.39789 | 4.41445 |
CDS Structure of MLOC_56246
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56246.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g20270.1 |
+2 |
2e-17 |
79 |
43/88 (49%) |
13111.m02051 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 | None | - | - | - | - | - |