MLOC_5621 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 24.2448 | 21.0418 | 23.2018 | 23.3289 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 27.6101 | 20.8556 | 20.6691 | 18.6998 |
| INF1 | Young developing inflorescences (5mm) | 1.06739 | 3.56022 | 7.72494 | 3.91268 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.164535 | 0.0876764 | 0.308905 | 0.201842 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 29.0578 | 20.9454 | 24.0765 | 24.8887 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 28.4991 | 17.5384 | 14.9264 | 41.9333 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 12.0791 | 12.4068 | 12.2054 | 12.7555 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.62852 | 1.96237 | 1.17957 | 4.38535 |
CDS Structure of MLOC_5621
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5621.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g64170.3 |
+1 |
0.0 |
526 |
279/357 (78%) |
13101.m06902 protein glycosyl hydrolases family 17, putative, expressed |
| TAIR PP10 |
AT2G27500.2 |
+1 |
2e-130 |
394 |
198/321 (62%) |
Glycosyl hydrolase superfamily protein | chr2:11752615-11753844 REVERSE LENGTH=377 |
