- Predicted Gene MLOC_56208
MLOC_56208 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.60446 | 2.05941 | 1.93965 | 2.02698 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.24526 | 5.11231 | 6.46939 | 3.62407 |
| INF1 | Young developing inflorescences (5mm) | 1.67818 | 1.21473 | 1.53417 | 1.24903 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.27922 | 1.93949 | 1.18827 | 1.68144 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 9.07834 | 3.91059 | 3.45348 | 4.23473 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.8753 | 14.9778 | 16.8229 | 29.7616 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.87289 | 2.04116 | 1.92104 | 1.89888 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.185765 | 0.0415811 | 0.120719 | 0.289126 |
CDS Structure of MLOC_56208
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56208.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g46420.1 |
+2 |
7e-112 |
343 |
214/295 (73%) |
13102.m05212 protein transposon protein, putative, unclassified, expressed |
| TAIR PP10 |
AT3G60200.1 |
+2 |
1e-12 |
69 |
101/309 (33%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G44600.1); Has 60 Blast hits to 60 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr3:22249320-22250237 FORWARD LENGTH=305 |