- Predicted Gene MLOC_56205
MLOC_56205 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56205_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56205_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 15.0127 | 13.4292 | 14.6485 | 14.5697 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.75878 | 0.993371 | 1.46024 | 2.4736 |
INF1 | Young developing inflorescences (5mm) | 3.51836 | 4.93377 | 4.11416 | 3.86249 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.93208 | 3.15251 | 3.15259 | 3.61603 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.5113 | 9.93933 | 8.37 | 11.2155 |
NOD | Developing tillers at six leaf stage, 3rd internode | 19.1633 | 13.3753 | 24.3353 | 40.438 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.3741 | 14.7998 | 12.3546 | 14.3719 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.141103 | 0.166022 | 0.158728 | 0.429866 |
CDS Structure of MLOC_56205
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56205.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g51280.1 |
+3 |
1e-80 |
265 |
181/224 (81%) |
13102.m05828 protein TCP-domain protein, putative, expressed |
TAIR PP10 |
AT1G69690.1 |
+3 |
3e-40 |
150 |
82/126 (65%) |
TCP family transcription factor | chr1:26216449-26217426 FORWARD LENGTH=325 |