MLOC_5618 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.14325 | 1.44196 | 2.00012 | 2.23515 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 140.417 | 4.67998 | 3.92344 | 41.3301 |
| INF1 | Young developing inflorescences (5mm) | 0.282161 | 0.0364069 | 0.0413356 | 0.109964 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.08309 | 1.14687 | 1.12876 | 1.46788 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 300.379 | 33.9303 | 25.6842 | 81.8833 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0564826 | 0.0121506 | 0.00382537 | 0.0319879 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 20.1299 | 21.6477 | 9.59067 | 20.9011 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 142.413 | 172.365 | 128.918 | 417.313 |
CDS Structure of MLOC_5618
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5618.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g01740.1 |
-2 |
0.0 |
1065 |
587/663 (89%) |
13104.m00087 protein heat shock protein, putative, expressed |
| TAIR PP10 |
AT5G52640.1 |
-2 |
0.0 |
1041 |
583/663 (88%) |
| Symbols: HSP81-1, ATHS83, HSP81.1, HSP83, ATHSP90.1, AtHsp90-1, HSP90.1 | heat shock protein 90.1 | chr5:21352542-21355147 FORWARD LENGTH=705 |
