MLOC_5617 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.70002 | 0.636133 | 0.831472 | 0.655016 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.202568 | 0.30657 | 0.395156 | 0.234121 |
| INF1 | Young developing inflorescences (5mm) | 1.52483 | 1.79728 | 1.78002 | 1.31436 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.18585 | 1.64085 | 1.52363 | 1.4351 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.617519 | 0.680728 | 0.927785 | 0.752267 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.144798 | 0.15878 | 0.410582 | 0.579092 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.05417 | 1.07563 | 1.16895 | 0.946633 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.28879 | 0.173618 | 0.35201 | 0.554411 |
CDS Structure of MLOC_5617
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5617.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g07330.1 |
-2 |
0.0 |
709 |
398/506 (79%) |
13103.m00816 protein pentatricopeptide, putative, expressed |
| TAIR PP10 |
AT5G56310.1 |
-2 |
2e-83 |
283 |
172/454 (38%) |
Pentatricopeptide repeat (PPR) superfamily protein | chr5:22802322-22803914 FORWARD LENGTH=530 |
