- Predicted Gene MLOC_56157
MLOC_56157 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56157_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56157_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.32582 | 5.03143 | 5.2893 | 4.3379 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.02224 | 5.84005 | 6.5302 | 5.47156 |
INF1 | Young developing inflorescences (5mm) | 7.18578 | 7.07289 | 6.17731 | 5.64948 |
INF2 | Developing inflorescences (1-1.5 cm) | 8.84068 | 9.50248 | 10.3045 | 10.0428 |
ROO | Roots from the seedlings (10 cm shoot stage) | 6.39094 | 7.87296 | 6.69507 | 8.16406 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.93294 | 8.41773 | 6.92184 | 24.049 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.41732 | 6.58839 | 7.27062 | 6.59468 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.32529 | 2.9619 | 2.16877 | 5.74446 |
CDS Structure of MLOC_56157
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56157.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g08850.1 |
-2 |
0.0 |
1080 |
540/692 (78%) |
13106.m00938 protein cyclic nucleotide-gated ion channel 14, putative, expressed |
TAIR PP10 |
AT4G30360.1 |
-2 |
0.0 |
777 |
390/661 (59%) |
| Symbols: ATCNGC17, CNGC17 | cyclic nucleotide-gated channel 17 | chr4:14855060-14857779 REVERSE LENGTH=720 |