- Predicted Gene MLOC_56149
MLOC_56149 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56149_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 15.0899 | 19.9514 | 17.1991 | 18.1604 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.1523 | 13.2376 | 14.0552 | 11.3363 |
INF1 | Young developing inflorescences (5mm) | 37.6019 | 37.236 | 34.8699 | 30.474 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.3739 | 25.3403 | 23.399 | 28.0189 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.84197 | 20.1684 | 13.2553 | 21.4901 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.91271 | 4.1268 | 7.49594 | 16.1244 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.1635 | 10.7062 | 10.1801 | 9.97398 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.35632 | 3.28484 | 3.28022 | 8.56283 |
CDS Structure of MLOC_56149
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56149.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g43130.1 |
+3 |
0.0 |
811 |
418/514 (81%) |
13101.m04447 protein DEAD/DEAH box helicase, putative, expressed |
TAIR PP10 |
AT5G08610.1 |
+3 |
0.0 |
664 |
338/494 (68%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:2790341-2794059 FORWARD LENGTH=850 |