MLOC_5613 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.358771 | 0.239993 | 0.363469 | 0.314628 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.433093 | 2.25191 | 2.60338 | 1.54594 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0.162545 | 0.302075 | 0.21169 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0664702 | 0.0616987 | 0 | 0.0908413 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.85667 | 4.28289 | 2.45365 | 4.92321 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.05399 | 0.678272 | 1.99725 | 3.15708 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0 | 0 | 0 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.171848 | 0.18083 | 0.25422 | 0.42787 |
CDS Structure of MLOC_5613
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_5613.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g38780.1 |
-1 |
4e-44 |
150 |
107/191 (56%) |
13111.m03812 protein EF hand family protein, putative |
| TAIR PP10 |
AT5G39670.1 |
-1 |
8e-22 |
91 |
47/112 (42%) |
Calcium-binding EF-hand family protein | chr5:15883270-15883884 FORWARD LENGTH=204 |