- Predicted Gene MLOC_56129
MLOC_56129 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 12.7258 | 10.9467 | 12.7218 | 11.887 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.7081 | 1.85076 | 4.86652 | 5.22668 |
| INF1 | Young developing inflorescences (5mm) | 25.5658 | 26.4157 | 28.3621 | 22.2242 |
| INF2 | Developing inflorescences (1-1.5 cm) | 26.3554 | 29.8326 | 29.682 | 30.1886 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.96773 | 9.99221 | 8.86603 | 11.0935 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 10.9679 | 15.7579 | 11.3961 | 49.27 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 12.8151 | 13.0495 | 13.2744 | 12.0852 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.90842 | 3.30291 | 4.20392 | 8.22599 |
CDS Structure of MLOC_56129
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56129.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g07790.1 |
-1 |
2e-137 |
399 |
221/250 (88%) |
13103.m00875 protein zinc finger, C3HC4 type domain containing protein, expressed |
| TAIR PP10 |
AT3G63530.2 |
-1 |
1e-61 |
203 |
122/248 (49%) |
| Symbols: BB, BB2 | RING/U-box superfamily protein | chr3:23456407-23457787 REVERSE LENGTH=248 |