- Predicted Gene MLOC_56128
MLOC_56128 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 24.0264 | 14.6999 | 15.7425 | 16.7276 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 26.3747 | 42.992 | 55.9058 | 33.4485 |
INF1 | Young developing inflorescences (5mm) | 6.42281 | 9.09879 | 9.53613 | 6.89691 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.88717 | 9.9119 | 10.0498 | 10.3108 |
ROO | Roots from the seedlings (10 cm shoot stage) | 64.662 | 41.1439 | 31.7567 | 48.387 |
NOD | Developing tillers at six leaf stage, 3rd internode | 27.9652 | 57.2295 | 61.9258 | 168.581 |
CAR5 | Developing grain, bracts removed (5 DPA) | 239.602 | 249.201 | 232.518 | 222.854 |
CAR15 | Developing grain, bracts removed (15 DPA) | 22.1899 | 25.6497 | 26.1087 | 54.959 |
CDS Structure of MLOC_56128
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56128.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g18454.2 |
-3 |
4e-105 |
316 |
153/224 (68%) |
13103.m02212 protein gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed |
TAIR PP10 |
AT1G07080.1 |
-3 |
7e-69 |
222 |
99/183 (54%) |
Thioredoxin superfamily protein | chr1:2170069-2171861 FORWARD LENGTH=265 |