- Predicted Gene MLOC_56112
MLOC_56112 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.942689 | 0.730931 | 0.404518 | 0.701876 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.238867 | 0.13596 | 0.257312 | 0.174025 |
| INF1 | Young developing inflorescences (5mm) | 0.474688 | 0.404039 | 0.0752003 | 0.295073 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.179623 | 0.226152 | 0.218253 | 0.232887 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.465068 | 0.65289 | 0.404682 | 0.708482 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.10256 | 0.197553 | 0.215072 | 0.557872 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.438739 | 0.609384 | 0.442084 | 0.496398 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.407161 | 0.388898 | 0.252285 | 0.894729 |
CDS Structure of MLOC_56112
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56112.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g38784.1 |
-1 |
2e-37 |
140 |
58/85 (68%) |
13109.m03875 protein retrotransposon protein, putative, unclassified |
| TAIR PP10 |
AT1G79480.2 |
-1 |
2e-37 |
137 |
56/85 (66%) |
Carbohydrate-binding X8 domain superfamily protein | chr1:29897905-29899267 REVERSE LENGTH=396 |