- Predicted Gene MLOC_56110
MLOC_56110 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.44305 | 2.21255 | 1.53674 | 1.7386 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.42215 | 3.40303 | 3.89813 | 3.22303 |
| INF1 | Young developing inflorescences (5mm) | 2.8489 | 2.65479 | 3.98483 | 2.36168 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.57933 | 3.42906 | 4.16986 | 3.67239 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.05209 | 1.12511 | 1.35526 | 1.29388 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.10524 | 2.81214 | 2.61392 | 8.85855 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 2.22513 | 2.4593 | 2.37733 | 2.10602 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.806241 | 0.690087 | 0.829634 | 1.60694 |
CDS Structure of MLOC_56110
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56110.20
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g52230.1 |
+1 |
0.0 |
993 |
518/748 (69%) |
13104.m05349 protein ent-kaurene synthase, chloroplast precursor, putative, expressed |
| TAIR PP10 |
AT1G79460.1 |
+1 |
0.0 |
655 |
365/748 (49%) |
| Symbols: GA2, KS, ATKS, ATKS1, KS1 | Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr1:29890568-29894436 FORWARD LENGTH=785 |