- Predicted Gene MLOC_56099
MLOC_56099 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56099_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56099_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 22.0543 | 36.0128 | 21.6365 | 28.4639 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 16.5292 | 24.7068 | 26.5059 | 19.0452 |
INF1 | Young developing inflorescences (5mm) | 7.7179 | 6.93844 | 11.1849 | 6.92433 |
INF2 | Developing inflorescences (1-1.5 cm) | 18.6504 | 11.5396 | 15.6386 | 15.9569 |
ROO | Roots from the seedlings (10 cm shoot stage) | 8.18548 | 10.9396 | 11.5079 | 12.5805 |
NOD | Developing tillers at six leaf stage, 3rd internode | 10.786 | 15.4832 | 19.3246 | 52.547 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.25873 | 8.9622 | 10.2174 | 8.55613 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.25158 | 4.28611 | 3.91293 | 9.35177 |
CDS Structure of MLOC_56099
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56099.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g03730.3 |
-1 |
0.0 |
1088 |
545/649 (84%) |
13111.m00315 protein alpha-N-arabinofuranosidase A, putative, expressed |
TAIR PP10 |
AT3G10740.1 |
-1 |
0.0 |
815 |
412/654 (63%) |
| Symbols: ASD1, ARAF1, ARAF, ATASD1 | alpha-L-arabinofuranosidase 1 | chr3:3361031-3364573 REVERSE LENGTH=678 |