MLOC_56095 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains23.406635.330935.924727.6661
LEAShoots from the seedlings (10 cm shoot stage)46.008953.303962.516940.684
INF1Young developing inflorescences (5mm)13.372514.054112.94629.66531
INF2Developing inflorescences (1-1.5 cm)9.212937.569638.714437.98898
ROORoots from the seedlings (10 cm shoot stage)15.545421.620230.663322.1539
NODDeveloping tillers at six leaf stage, 3rd internode36.376427.761157.5743101.13
CAR5Developing grain, bracts removed (5 DPA)21.642521.061622.017417.7402
CAR15Developing grain, bracts removed (15 DPA)10.451610.24018.9702219.3428



CDS Structure of MLOC_56095






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_56095.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367157NoneNoneNoneNone
MLOC_56095.4CUST_3554_PI427708080AvailableAvailablecontig_40549 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g33080.3 -1 0.0 882 455/520 (88%) 13104.m11842 protein protein phosphatase 2C, putative, expressed
TAIR PP10 AT3G16560.1 -1 1e-157 474 275/499 (55%) Protein phosphatase 2C family protein | chr3:5636051-5637702 REVERSE LENGTH=493