- Predicted Gene MLOC_56095
MLOC_56095 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56095_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56095_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 23.4066 | 35.3309 | 35.9247 | 27.6661 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 46.0089 | 53.3039 | 62.5169 | 40.684 |
INF1 | Young developing inflorescences (5mm) | 13.3725 | 14.0541 | 12.9462 | 9.66531 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.21293 | 7.56963 | 8.71443 | 7.98898 |
ROO | Roots from the seedlings (10 cm shoot stage) | 15.5454 | 21.6202 | 30.6633 | 22.1539 |
NOD | Developing tillers at six leaf stage, 3rd internode | 36.3764 | 27.7611 | 57.5743 | 101.13 |
CAR5 | Developing grain, bracts removed (5 DPA) | 21.6425 | 21.0616 | 22.0174 | 17.7402 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.4516 | 10.2401 | 8.97022 | 19.3428 |
CDS Structure of MLOC_56095
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56095.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g33080.3 |
-1 |
0.0 |
882 |
455/520 (88%) |
13104.m11842 protein protein phosphatase 2C, putative, expressed |
TAIR PP10 |
AT3G16560.1 |
-1 |
1e-157 |
474 |
275/499 (55%) |
Protein phosphatase 2C family protein | chr3:5636051-5637702 REVERSE LENGTH=493 |