- Predicted Gene MLOC_56094
MLOC_56094 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56094_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56094_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.85958 | 4.67725 | 4.50649 | 4.82707 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 48.7363 | 92.7343 | 89.0878 | 61.0586 |
INF1 | Young developing inflorescences (5mm) | 7.2059 | 6.1513 | 8.1457 | 5.85785 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.69292 | 7.47836 | 7.41791 | 7.68211 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.59059 | 4.034 | 3.29135 | 4.7829 |
NOD | Developing tillers at six leaf stage, 3rd internode | 11.8823 | 11.0636 | 20.17 | 37.9462 |
CAR5 | Developing grain, bracts removed (5 DPA) | 16.4513 | 16.7406 | 17.3333 | 15.9071 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.16747 | 6.59448 | 7.20398 | 15.7667 |
CDS Structure of MLOC_56094
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56094.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g33060.1 |
+3 |
2e-159 |
464 |
235/261 (90%) |
13104.m03186 protein NAD dependent epimerase/dehydratase family protein, putative, expressed |
TAIR PP10 |
AT1G32220.1 |
+3 |
5e-130 |
388 |
180/253 (71%) |
NAD(P)-binding Rossmann-fold superfamily protein | chr1:11608038-11609591 FORWARD LENGTH=296 |