- Predicted Gene MLOC_56093
MLOC_56093 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56093_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56093_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.3975 | 18.2511 | 16.3452 | 14.4955 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 22.1012 | 12.8701 | 10.5008 | 12.7683 |
INF1 | Young developing inflorescences (5mm) | 25.8674 | 24.6631 | 27.3157 | 19.5185 |
INF2 | Developing inflorescences (1-1.5 cm) | 25.6368 | 24.2522 | 23.8432 | 25.1089 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.28326 | 14.8033 | 10.1114 | 14.9637 |
NOD | Developing tillers at six leaf stage, 3rd internode | 32.2392 | 29.87 | 32.0727 | 97.7088 |
CAR5 | Developing grain, bracts removed (5 DPA) | 16.4549 | 15.4444 | 16.3849 | 14.3696 |
CAR15 | Developing grain, bracts removed (15 DPA) | 29.5293 | 25.334 | 24.3125 | 55.5383 |
CDS Structure of MLOC_56093
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56093.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g11960.1 |
-1 |
0.0 |
1124 |
583/829 (70%) |
13111.m01266 protein disease resistance protein RPM1, putative, expressed |
TAIR PP10 |
AT3G07040.1 |
-1 |
2e-112 |
376 |
264/883 (30%) |
| Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926 |