- Predicted Gene MLOC_56084
MLOC_56084 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56084_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56084_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 123.425 | 82.2969 | 89.7976 | 99.8791 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 57.0395 | 52.9235 | 74.4772 | 53.5903 |
INF1 | Young developing inflorescences (5mm) | 82.9932 | 89.1717 | 85.9962 | 76.7904 |
INF2 | Developing inflorescences (1-1.5 cm) | 59.6526 | 73.4143 | 74.1226 | 79.7954 |
ROO | Roots from the seedlings (10 cm shoot stage) | 139.521 | 98.5924 | 98.2169 | 133.705 |
NOD | Developing tillers at six leaf stage, 3rd internode | 62.5511 | 69.2596 | 47.9635 | 214.935 |
CAR5 | Developing grain, bracts removed (5 DPA) | 91.5095 | 93.5472 | 86.5685 | 95.2112 |
CAR15 | Developing grain, bracts removed (15 DPA) | 19.6993 | 18.9669 | 18.7984 | 47.7945 |
CDS Structure of MLOC_56084
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56084.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g32800.1 |
+3 |
3e-150 |
428 |
208/221 (94%) |
13109.m03279 protein peptidase, T1 family, putative, expressed |
TAIR PP10 |
AT3G60820.3 |
+3 |
2e-117 |
344 |
163/213 (77%) |
| Symbols: PBF1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein | chr3:22472038-22473809 REVERSE LENGTH=223 |