- Predicted Gene MLOC_56053
MLOC_56053 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.78107 | 11.0454 | 9.07919 | 9.42249 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 42.0601 | 48.4843 | 35.8455 | 37.2911 |
| INF1 | Young developing inflorescences (5mm) | 13.1583 | 11.9995 | 12.4971 | 10.5709 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.1864 | 13.8958 | 12.7948 | 14.2776 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.22132 | 2.99143 | 3.12405 | 3.52246 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 12.0601 | 11.1885 | 13.4413 | 41.5075 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.1062 | 14.329 | 15.3791 | 14.5117 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.73863 | 7.4599 | 7.33029 | 17.062 |
CDS Structure of MLOC_56053
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56053.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g13660.1 |
-1 |
0.0 |
1432 |
813/918 (89%) |
13106.m01508 protein alanyl-tRNA synthetase, putative, expressed |
| TAIR PP10 |
AT5G22800.1 |
-1 |
0.0 |
1147 |
647/938 (69%) |
| Symbols: EMB86, EMB1030, EMB263 | Alanyl-tRNA synthetase, class IIc | chr5:7616221-7619961 REVERSE LENGTH=978 |