- Predicted Gene MLOC_56051
MLOC_56051 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_56051_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_56051_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.693206 | 2.86964 | 2.316 | 2.08916 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 228.55 | 179.054 | 234.855 | 172.508 |
INF1 | Young developing inflorescences (5mm) | 1.45664 | 0.741549 | 0.792035 | 0.850085 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.17169 | 4.24224 | 6.5201 | 5.16104 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.02172 | 4.56017 | 12.3519 | 5.31358 |
NOD | Developing tillers at six leaf stage, 3rd internode | 40.695 | 19.147 | 15.4054 | 54.2003 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.77987 | 2.39978 | 1.17363 | 2.08609 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.198188 | 0.303184 | 0.230923 | 0.589406 |
CDS Structure of MLOC_56051
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56051.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g52240.1 |
-2 |
2e-169 |
479 |
232/253 (92%) |
13101.m05463 protein chlorophyll A-B binding protein, putative, expressed |
TAIR PP10 |
AT2G34420.1 |
-2 |
3e-157 |
448 |
223/253 (88%) |
| Symbols: LHB1B2, LHCB1.5 | photosystem II light harvesting complex gene B1B2 | chr2:14522716-14523513 REVERSE LENGTH=265 |