- Predicted Gene MLOC_56007
MLOC_56007 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.3018 | 10.5419 | 9.80446 | 11.6968 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 21.5925 | 41.9326 | 40.4631 | 28.5378 |
| INF1 | Young developing inflorescences (5mm) | 0.0626314 | 0.0380521 | 0.058892 | 0.0501678 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0173498 | 0 | 0.100568 | 0.0610104 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 53.4699 | 67.9624 | 63.6111 | 76.285 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.2949 | 3.22144 | 6.64053 | 11.0878 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.950449 | 0.937728 | 0.851156 | 1.02143 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.662733 | 0.843764 | 0.638242 | 2.03738 |
CDS Structure of MLOC_56007
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_56007.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g40818.1 |
+1 |
0.0 |
602 |
311/464 (67%) |
13106.m04254 protein aspartic proteinase, putative, expressed |
| TAIR PP10 |
AT5G10770.1 |
+1 |
1e-119 |
369 |
194/463 (42%) |
Eukaryotic aspartyl protease family protein | chr5:3403331-3405331 REVERSE LENGTH=474 |