- Predicted Gene MLOC_55982
MLOC_55982 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55982_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.105 | 22.4603 | 21.4811 | 19.4065 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 27.8243 | 27.6482 | 23.9309 | 23.3678 |
INF1 | Young developing inflorescences (5mm) | 31.1699 | 29.0212 | 26.1441 | 24.4918 |
INF2 | Developing inflorescences (1-1.5 cm) | 36.118 | 33.5388 | 32.7364 | 38.2261 |
ROO | Roots from the seedlings (10 cm shoot stage) | 15.6565 | 28.3293 | 21.744 | 32.5241 |
NOD | Developing tillers at six leaf stage, 3rd internode | 25.3988 | 28.6186 | 24.0915 | 100.214 |
CAR5 | Developing grain, bracts removed (5 DPA) | 42.1129 | 34.2275 | 38.4081 | 37.5687 |
CAR15 | Developing grain, bracts removed (15 DPA) | 19.0563 | 18.2697 | 18.1122 | 42.3264 |
CDS Structure of MLOC_55982
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55982.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g50840.2 |
-2 |
0.0 |
1910 |
1124/1680 (67%) |
13102.m05772 protein BAH domain containing protein, putative, expressed |
TAIR PP10 |
AT3G48050.2 |
-2 |
6e-175 |
580 |
395/811 (49%) |
BAH domain ;TFIIS helical bundle-like domain | chr3:17734270-17739412 REVERSE LENGTH=1613 |