- Predicted Gene MLOC_55976
MLOC_55976 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55976_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55976_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.31202 | 0.778957 | 0.778461 | 0.81308 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.26758 | 2.36358 | 3.9459 | 3.37273 |
INF1 | Young developing inflorescences (5mm) | 0.22338 | 0.259692 | 0.547475 | 0.224106 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.79282 | 0.653363 | 0.862933 | 0.693928 |
ROO | Roots from the seedlings (10 cm shoot stage) | 45.0673 | 10.9501 | 10.5482 | 18.3515 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.34549 | 1.50814 | 0.599573 | 3.58505 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.80198 | 3.82848 | 2.89604 | 2.77861 |
CAR15 | Developing grain, bracts removed (15 DPA) | 27.3492 | 23.6342 | 22.1735 | 47.9129 |
CDS Structure of MLOC_55976
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55976.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g53320.1 |
-1 |
9e-92 |
296 |
145/165 (88%) |
13102.m06088 protein universal stress protein domain containing protein, putative, expressed |
TAIR PP10 |
AT3G03270.2 |
-1 |
8e-58 |
199 |
94/153 (61%) |
Adenine nucleotide alpha hydrolases-like superfamily protein | chr3:762136-763075 REVERSE LENGTH=159 |