- Predicted Gene MLOC_55975
MLOC_55975 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55975_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55975_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 23.3676 | 22.934 | 27.7096 | 22.0043 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 36.325 | 38.7988 | 32.9161 | 28.3346 |
INF1 | Young developing inflorescences (5mm) | 16.2059 | 15.1781 | 15.4479 | 11.9416 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.9233 | 11.7392 | 13.2387 | 11.7797 |
ROO | Roots from the seedlings (10 cm shoot stage) | 30.3065 | 24.5985 | 28.4937 | 28.5937 |
NOD | Developing tillers at six leaf stage, 3rd internode | 28.1659 | 18.289 | 21.6728 | 58.7288 |
CAR5 | Developing grain, bracts removed (5 DPA) | 26.0378 | 27.9641 | 29.3232 | 24.484 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.2744 | 8.27202 | 9.23964 | 19.6248 |
CDS Structure of MLOC_55975
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55975.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g53330.2 |
+2 |
0.0 |
629 |
333/370 (90%) |
13102.m06092 protein 1-aminocyclopropane-1-carboxylate deaminase, putative, expressed |
TAIR PP10 |
AT1G48420.1 |
+2 |
8e-177 |
531 |
268/371 (72%) |
| Symbols: D-CDES, ATACD1, ACD1 | D-cysteine desulfhydrase | chr1:17896767-17898803 REVERSE LENGTH=401 |