- Predicted Gene MLOC_55971
MLOC_55971 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.4917 | 5.04936 | 6.62931 | 7.76445 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.29807 | 5.30228 | 3.17098 | 5.46452 |
| INF1 | Young developing inflorescences (5mm) | 14.2908 | 9.96543 | 10.4366 | 11.8635 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.79751 | 8.11817 | 7.71625 | 10.1418 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.54874 | 7.65878 | 4.1822 | 12.5857 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 57.252 | 10.0583 | 41.2746 | 56.7242 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.74262 | 3.41109 | 4.91283 | 5.38691 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.484678 | 0.484106 | 0.473454 | 1.44039 |
CDS Structure of MLOC_55971
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55971.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g18150.1 |
-2 |
4e-157 |
452 |
230/274 (84%) |
13103.m02174 protein protein phosphatase 2C, putative, expressed |
| TAIR PP10 |
AT2G30020.1 |
-2 |
4e-98 |
301 |
158/269 (59%) |
Protein phosphatase 2C family protein | chr2:12814437-12815904 FORWARD LENGTH=396 |