- Predicted Gene MLOC_55970
MLOC_55970 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 26.3597 | 25.0861 | 27.3425 | 25.0657 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 40.0056 | 26.3892 | 26.0501 | 26.2553 |
| INF1 | Young developing inflorescences (5mm) | 36.7602 | 54.4669 | 47.0322 | 36.9748 |
| INF2 | Developing inflorescences (1-1.5 cm) | 39.6805 | 42.3973 | 46.7077 | 42.3613 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 61.1355 | 41.7228 | 38.1395 | 52.4871 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 33.2695 | 53.7913 | 24.4332 | 158.726 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 29.9922 | 31.0104 | 26.2107 | 26.0187 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 11.8485 | 9.92427 | 12.9784 | 24.4479 |
CDS Structure of MLOC_55970
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55970.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g03780.1 |
+3 |
1e-98 |
311 |
151/174 (87%) |
13105.m00370 protein cation efflux family protein, putative, expressed |
| TAIR PP10 |
AT2G46800.2 |
+3 |
1e-73 |
244 |
126/173 (73%) |
| Symbols: ZAT, ATMTP1, MTP1, ZAT1, ATCDF1 | zinc transporter of Arabidopsis thaliana | chr2:19238128-19239324 FORWARD LENGTH=398 |