MLOC_55968 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains48.834639.388238.401738.1675
LEAShoots from the seedlings (10 cm shoot stage)41.70072.570863.0736113.1092
INF1Young developing inflorescences (5mm)250.77371.658295.576251.538
INF2Developing inflorescences (1-1.5 cm)262.988281.28261.673280.895
ROORoots from the seedlings (10 cm shoot stage)59.649972.366977.648970.4906
NODDeveloping tillers at six leaf stage, 3rd internode3.805620.8817410.54182.15244
CAR5Developing grain, bracts removed (5 DPA)4.25014.346232.625963.41986
CAR15Developing grain, bracts removed (15 DPA)1.792650.7165861.419193.10443



CDS Structure of MLOC_55968






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55968.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251628.1NoneNoneNoneNone
MLOC_55968.1CUST_13510_PI427708083AvailableAvailablecontig_40436 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g38140.1 -1 5e-36 133 70/130 (54%) 13112.m03927 protein expressed protein
TAIR PP10None-----