MLOC_55950 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.74632.723343.618393.27455
LEAShoots from the seedlings (10 cm shoot stage)2.093790.6946050.6150120.973784
INF1Young developing inflorescences (5mm)6.339487.436946.311526.00357
INF2Developing inflorescences (1-1.5 cm)3.923254.669544.63584.95095
ROORoots from the seedlings (10 cm shoot stage)9.328778.004166.490589.06401
NODDeveloping tillers at six leaf stage, 3rd internode1.733042.516451.925195.42071
CAR5Developing grain, bracts removed (5 DPA)2.502412.819272.261052.41824
CAR15Developing grain, bracts removed (15 DPA)0.2353750.1315840.3030140.510969



CDS Structure of MLOC_55950






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55950.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370163NoneNoneNoneNone
MLOC_55950.1CUST_3522_PI427708080AvailableAvailablecontig_40410 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g39650.1 -3 0.0 1015 597/871 (69%) 13104.m03846 protein receptor protein kinase CLAVATA1 precursor, putative, expressed
TAIR PP10 AT5G06940.1 -3 0.0 635 367/836 (44%) Leucine-rich repeat receptor-like protein kinase family protein | chr5:2148078-2150771 REVERSE LENGTH=872