MLOC_55949 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains41.308937.821341.275639.1001
LEAShoots from the seedlings (10 cm shoot stage)32.04225.466529.84124.1573
INF1Young developing inflorescences (5mm)62.524868.497267.402657.7464
INF2Developing inflorescences (1-1.5 cm)68.576266.709964.341475.609
ROORoots from the seedlings (10 cm shoot stage)55.15144.685142.470353.3734
NODDeveloping tillers at six leaf stage, 3rd internode26.620729.136239.9875103.709
CAR5Developing grain, bracts removed (5 DPA)53.917159.285458.230358.2381
CAR15Developing grain, bracts removed (15 DPA)24.047720.856725.791656.9496



CDS Structure of MLOC_55949






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55949.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362571NoneNoneNoneNone
MLOC_55949.1CUST_3521_PI427708080AvailableAvailablecontig_40410 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g39660.1 +3 0.0 659 363/488 (74%) 13104.m03847 protein OsFBDUF22 - F-box and DUF domain containing protein, expressed
TAIR PP10None-----