- Predicted Gene MLOC_55945
MLOC_55945 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55945_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55945_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 52.4464 | 36.1297 | 35.0879 | 36.9437 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 17.6769 | 14.0367 | 21.5526 | 13.2107 |
INF1 | Young developing inflorescences (5mm) | 50.2276 | 58.5723 | 60.8415 | 43.9143 |
INF2 | Developing inflorescences (1-1.5 cm) | 32.1818 | 38.7748 | 34.1231 | 36.44 |
ROO | Roots from the seedlings (10 cm shoot stage) | 44.2568 | 41.2701 | 40.1475 | 43.064 |
NOD | Developing tillers at six leaf stage, 3rd internode | 4.57981 | 3.58459 | 8.7645 | 11.5358 |
CAR5 | Developing grain, bracts removed (5 DPA) | 28.3779 | 35.5504 | 36.8662 | 31.2853 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.29303 | 6.72516 | 6.71866 | 16.4761 |
CDS Structure of MLOC_55945
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55945.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g40490.1 |
+3 |
1e-48 |
163 |
81/93 (87%) |
13102.m04513 protein conserved hypothetical protein |
TAIR PP10 |
AT5G39800.1 |
+3 |
3e-36 |
128 |
60/77 (78%) |
Mitochondrial ribosomal protein L27 | chr5:15935580-15936936 FORWARD LENGTH=94 |