- Predicted Gene MLOC_55943
MLOC_55943 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 42.8422 | 45.5267 | 44.4499 | 41.4571 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 47.7748 | 40.7786 | 47.4499 | 36.3192 |
| INF1 | Young developing inflorescences (5mm) | 42.202 | 46.5483 | 43.6038 | 34.3804 |
| INF2 | Developing inflorescences (1-1.5 cm) | 34.7433 | 37.9182 | 37.1885 | 36.2908 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 53.6027 | 64.9513 | 58.2289 | 68.3202 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 57.954 | 64.1838 | 70.1668 | 193.111 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 33.8528 | 38.286 | 33.2534 | 31.2484 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 13.5543 | 14.3622 | 12.1902 | 28.445 |
CDS Structure of MLOC_55943
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55943.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g02350.1 |
-3 |
0.0 |
618 |
317/333 (95%) |
13107.m00159 protein casein kinase II subunit alpha-2, putative, expressed |
| TAIR PP10 |
AT3G50000.1 |
-3 |
0.0 |
596 |
304/333 (91%) |
| Symbols: CKA2, ATCKA2 | casein kinase II, alpha chain 2 | chr3:18534487-18536743 FORWARD LENGTH=403 |