- Predicted Gene MLOC_55936
MLOC_55936 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 13.8498 | 21.1323 | 16.4566 | 20.0362 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 10.9821 | 6.29317 | 3.98155 | 6.36288 |
INF1 | Young developing inflorescences (5mm) | 17.6948 | 22.4089 | 29.9254 | 21.2942 |
INF2 | Developing inflorescences (1-1.5 cm) | 6.1157 | 7.78444 | 6.37204 | 8.07291 |
ROO | Roots from the seedlings (10 cm shoot stage) | 15.7086 | 28.2736 | 20.4729 | 34.6417 |
NOD | Developing tillers at six leaf stage, 3rd internode | 36.1055 | 35.3411 | 5.05349 | 100.761 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.4468 | 8.13414 | 7.5245 | 8.49305 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.05296 | 2.54297 | 2.48876 | 5.91993 |
CDS Structure of MLOC_55936
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55936.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g03290.1 |
-3 |
0.0 |
622 |
320/451 (71%) |
13111.m00267 protein nucleoside-triphosphatase, putative, expressed |
TAIR PP10 |
AT3G04080.1 |
-3 |
2e-132 |
397 |
201/400 (50%) |
| Symbols: ATAPY1, APY1 | apyrase 1 | chr3:1068068-1070917 REVERSE LENGTH=471 |