MLOC_55931 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.085826.246922.008621.7137
LEAShoots from the seedlings (10 cm shoot stage)15.1674.013445.189717.05467
INF1Young developing inflorescences (5mm)15.311110.68017.551719.69638
INF2Developing inflorescences (1-1.5 cm)14.256420.907719.784819.8826
ROORoots from the seedlings (10 cm shoot stage)8.1993613.51689.5702614.9657
NODDeveloping tillers at six leaf stage, 3rd internode9.9534711.72595.8123333.9654
CAR5Developing grain, bracts removed (5 DPA)31.300131.146233.617531.105
CAR15Developing grain, bracts removed (15 DPA)5.532313.779145.7622811.1671



CDS Structure of MLOC_55931






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55931.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55931.1CUST_13450_PI427708080AvailableAvailablecontig_40396 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g40200.1 -2 0.0 873 507/641 (79%) 13105.m04240 protein inactive receptor kinase At2g26730 precursor, putative, expressed
TAIR PP10 AT5G58300.2 -2 0.0 655 366/621 (59%) Leucine-rich repeat protein kinase family protein | chr5:23572821-23574871 FORWARD LENGTH=654