- Predicted Gene MLOC_55924
MLOC_55924 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55924_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55924_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 10.9304 | 7.07099 | 7.93858 | 8.21658 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.51426 | 7.85774 | 9.15507 | 6.50166 |
INF1 | Young developing inflorescences (5mm) | 8.00804 | 7.93538 | 8.92231 | 7.02744 |
INF2 | Developing inflorescences (1-1.5 cm) | 11.3267 | 11.5804 | 11.1491 | 12.5371 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.4609 | 13.0984 | 11.1437 | 15.3071 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.44923 | 10.1608 | 9.64714 | 31.4903 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.55538 | 10.1703 | 9.62993 | 8.89144 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.55685 | 3.01514 | 2.81054 | 6.62169 |
CDS Structure of MLOC_55924
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55924.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g10050.1 |
-3 |
4e-119 |
359 |
180/200 (90%) |
13102.m01109 protein expressed protein |
TAIR PP10 |
AT2G22370.1 |
-3 |
2e-99 |
307 |
145/200 (73%) |
unknown protein; Has 127 Blast hits to 127 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr2:9501019-9502078 REVERSE LENGTH=219 |