- Predicted Gene MLOC_55923
MLOC_55923 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_55923_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_55923_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 4.17706 | 9.67985 | 7.80821 | 6.93173 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.75392 | 2.52713 | 3.05383 | 2.4457 |
INF1 | Young developing inflorescences (5mm) | 7.02867 | 7.50782 | 7.47824 | 5.56455 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.27465 | 7.19041 | 6.41392 | 6.97284 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.56981 | 5.84424 | 2.98741 | 5.17858 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.01898 | 2.4883 | 1.68025 | 6.67969 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.31852 | 5.76852 | 5.95981 | 5.1885 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.64882 | 1.68526 | 1.83963 | 3.59925 |
CDS Structure of MLOC_55923
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_55923.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g14260.2 |
+3 |
0.0 |
1445 |
766/1490 (51%) |
13103.m01670 protein guanine nucleotide exchange family protein, putative, expressed |
TAIR PP10 |
AT4G38200.1 |
+3 |
0.0 |
1847 |
1001/1707 (59%) |
SEC7-like guanine nucleotide exchange family protein | chr4:17915293-17922502 FORWARD LENGTH=1687 |