MLOC_55923 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.177069.679857.808216.93173
LEAShoots from the seedlings (10 cm shoot stage)3.753922.527133.053832.4457
INF1Young developing inflorescences (5mm)7.028677.507827.478245.56455
INF2Developing inflorescences (1-1.5 cm)7.274657.190416.413926.97284
ROORoots from the seedlings (10 cm shoot stage)2.569815.844242.987415.17858
NODDeveloping tillers at six leaf stage, 3rd internode2.018982.48831.680256.67969
CAR5Developing grain, bracts removed (5 DPA)6.318525.768525.959815.1885
CAR15Developing grain, bracts removed (15 DPA)1.648821.685261.839633.59925



CDS Structure of MLOC_55923






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55923.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_55923.3CUST_13449_PI427708080AvailableAvailablecontig_40393 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g14260.2 +3 0.0 1445 766/1490 (51%) 13103.m01670 protein guanine nucleotide exchange family protein, putative, expressed
TAIR PP10 AT4G38200.1 +3 0.0 1847 1001/1707 (59%) SEC7-like guanine nucleotide exchange family protein | chr4:17915293-17922502 FORWARD LENGTH=1687