MLOC_55914 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0.03237650.038095400.0316223
INF1Young developing inflorescences (5mm)0.03117070.03776260.04035840.0388581
INF2Developing inflorescences (1-1.5 cm)0.0541580.01715940.06325020.0614182
ROORoots from the seedlings (10 cm shoot stage)0.096251600.05367680.0402085
NODDeveloping tillers at six leaf stage, 3rd internode00.0042118800.0380143
CAR5Developing grain, bracts removed (5 DPA)00.03971900.0696092
CAR15Developing grain, bracts removed (15 DPA)0.0957010.1149080.0801830.294638



CDS Structure of MLOC_55914






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_55914.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376146NoneNoneNoneNone
MLOC_55914.1CUST_3516_PI427708080AvailableAvailablecontig_40386 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g69240.1 +1 0.0 612 331/420 (79%) 13101.m07562 protein CBS domain containing membrane protein, putative, expressed
TAIR PP10 AT3G48530.1 +1 6e-146 431 228/418 (55%) | Symbols: KING1 | SNF1-related protein kinase regulatory subunit gamma 1 | chr3:17987559-17989592 FORWARD LENGTH=424